I would probably have done it with a 3D oeration rather than the plug-in, but the plugin was written because there was a high mumber of people asking to do this sort of thing. The script works, but, "Width : The width of the surface to cut. Use 0 to machine a slot. The tool diameter is not taken into account." Its a crude brute force tool.
While not exactly what you were asking about here is a 3D way to make a "pocket" with varying bottom geometry.
Simple 3D Mold Demo Using ViaCad & CamBam - YouTube
Bob La Londe
http://www.YumaBassMan.com