Hi m8kingit,
Once you set the native units you should not change it unless you want to alter the complete set up of the machine. Pick either in or mm and stick with it
Auto setting -
1st - jog away in the negative direction as far as you can.
2nd - Go to settings page
3rd - Click on the set steps per unit located above the reset button
4th - Select the axis that you wish to calibrate
5th - Enter the amount you wish to move with out using a negative sign and press enter. Note, the machine will move.
A small value of movement should be done first.
6th - enter how much the machine actually moved then press enter.
7th - Allow new value and press enter
Reboot software - VERY Important
repeat the above using a
larger travel value. The larger the travel, the closer you will get
Happy chip making
Kirk